目前该书引入的 R 包已经相当多了,R 包需要的系统依赖也很多,接下来将尽量不再引入新的依赖,如非确实必要也可加!感觉维护这玩意太累了,最近一次想添加制作视频动画的依赖就废了好大功夫,目前 Travis 编译一次竟然需要23分钟,这应该也是我想使得本书在线编译的必然结果。
Rscript -e "sessionInfo(.packages(T));capabilities()"
R version 3.6.1 (2017-01-27)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 16.04.6 LTS
Matrix products: default
BLAS: /home/travis/R-bin/lib/R/lib/libRblas.so
LAPACK: /home/travis/R-bin/lib/R/lib/libRlapack.so
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] base compiler datasets graphics grDevices grid methods
[8] parallel splines stats stats4 tcltk tools utils
other attached packages:
[1] abind_1.4-7 alphahull_2.2 animation_2.6
[4] aplpack_1.3.3 askpass_1.1 assertthat_0.2.1
[7] av_0.3 backports_1.1.5 base64enc_0.1-3
[10] BH_1.69.0-1 bitops_1.0-6 bookdown_0.14
[13] broom_0.5.2 cairoDevice_2.28 callr_3.3.2
[16] caTools_1.17.1.2 cellranger_1.1.0 classInt_0.4-1
[19] cli_1.1.0 clipr_0.7.0 coda_0.19-3
[22] colorspace_1.4-2 corrplot_0.84 cowplot_1.0.0
[25] crayon_1.3.4 crosstalk_1.0.0 curl_4.2
[28] data.table_1.12.4 DBI_1.0.0 dbplyr_1.4.2
[31] deldir_0.1-23 dendextend_1.12.0 digest_0.6.21
[34] dplyr_0.8.3 e1071_1.7-2 ellipsis_0.3.0
[37] evaluate_0.14 fansi_0.4.0 farver_1.1.0
[40] fastmap_1.0.1 filehash_2.4-2 forcats_0.4.0
[43] foreach_1.5.1 formatR_1.7 fs_1.3.1
[46] fun_0.2 gclus_1.3.2 gdata_2.18.0
[49] gdtools_0.2.1 generics_0.0.2 GGally_1.4.0
[52] gganimate_1.0.3.9000 ggplot2_3.2.1 ggpointdensity_0.1.0
[55] gifski_0.8.6 glue_1.3.1 goftest_1.1-1
[58] gplots_3.0.3 gridExtra_2.3 gtable_0.3.0
[61] gtools_3.8.1 gWidgets_0.0-54.1 gWidgetsRGtk2_0.0-86
[64] haven_2.1.1 heatmaply_0.16.0 hexbin_1.27.3
[67] highr_0.8 hms_0.5.1 htmltools_0.4.0
[70] htmlwidgets_1.5.1 httpuv_1.5.2 httr_1.4.1
[73] igraph_1.2.4.1 iplots_1.1-7.1 iterators_1.0.12
[76] jsonlite_1.6 knitr_1.25 labeling_0.3
[79] later_1.0.0 latex2exp_0.4.0 lazyeval_0.2.2
[82] leaflet_2.0.2 lifecycle_0.1.0 lmtest_0.9-37
[85] lpSolve_5.6.13.3 lubridate_1.7.4 magick_2.2
[88] magrittr_1.5 manipulateWidget_0.10.0 maps_3.3.0
[91] maptools_0.9-8 markdown_1.1 MatrixModels_0.4-2
[94] mime_0.7 miniUI_0.1.1.1 misc3d_0.8-4
[97] modelr_0.1.5 MSG_0.4 munsell_0.5.0
[100] mvtnorm_1.0-11 network_1.15 openssl_1.4.1
[103] pdftools_2.2 pillar_1.4.2 pkgconfig_2.0.3
[106] plogr_0.2.0 plot3D_1.1.1 plotly_4.9.0
[109] plotrix_3.7-6 plyr_1.8.4 png_0.1-7
[112] polyclip_1.10-0 prettyunits_1.0.2 processx_3.4.1
[115] progress_1.2.2 promises_1.1.0 ps_1.3.0
[118] purrr_0.3.2 qap_0.1-1 qpdf_1.1
[121] quantreg_5.51 R.methodsS3_1.7.1 R.oo_1.22.0
[124] R.utils_2.9.0 R6_2.4.0 randomForest_4.6-14
[127] raster_3.0-7 RColorBrewer_1.1-2 Rcpp_1.0.2
[130] readr_1.3.1 readxl_1.3.1 registry_0.5-1
[133] rematch_1.0.1 remotes_2.1.0 reprex_0.3.0
[136] reshape_0.8.8 reshape2_1.4.3 rgeos_0.5-2
[139] rggobi_2.1.22 rgl_0.100.31 RgoogleMaps_1.4.4
[142] RGtk2_2.20.36 rJava_0.9-11 rlang_0.4.0
[145] rmarkdown_1.16 rstudioapi_0.10 rvest_0.3.4
[148] scales_1.0.0 scatterplot3d_0.3-41 selectr_0.4-1
[151] seriation_1.2-8 sf_0.8-0 sgeostat_1.0-27
[154] shiny_1.4.0 showtext_0.7 showtextdb_2.0
[157] signal_0.7-6 sm_2.2-5.6 sna_2.4
[160] sourcetools_0.1.7 sp_1.3-1 SparseM_1.77
[163] spatstat_1.61-0 spatstat.data_1.4-0 spatstat.utils_1.13-0
[166] splancs_2.01-40 statnet.common_4.3.0 stringi_1.4.3
[169] stringr_1.4.0 svglite_1.2.2 sys_3.3
[172] sysfonts_0.8 systemfonts_0.1.1 TeachingDemos_2.11
[175] tensor_1.5 tibble_2.1.3 tidyr_1.0.0
[178] tidyselect_0.2.5 tidyverse_1.2.1 tikzDevice_0.12.3
[181] tinytex_0.16 transformr_0.1.1 tripack_1.3-8
[184] TSP_1.1-7 tuneR_1.3.3 tweenr_1.0.1
[187] units_0.6-5 utf8_1.1.4 vcd_1.4-4
[190] vctrs_0.2.0 vioplot_0.3.2 viridis_0.5.1
[193] viridisLite_0.3.0 webshot_0.5.1 whisker_0.4
[196] withr_2.1.2 xfun_0.10 xml2_1.2.2
[199] xtable_1.8-5 yaml_2.2.0 zeallot_0.1.0
[202] zoo_1.8-7 boot_1.3-22 class_7.3-15
[205] cluster_2.1.0 codetools_0.2-16 foreign_0.8-71
[208] KernSmooth_2.23-15 lattice_0.20-38 MASS_7.3-51.4
[211] Matrix_1.2-17 mgcv_1.8-28 nlme_3.1-140
[214] nnet_7.3-12 rpart_4.1-15 spatial_7.3-11
[217] survival_2.44-1.1
jpeg png tiff tcltk X11 aqua
TRUE TRUE TRUE TRUE TRUE FALSE
http/ftp sockets libxml fifo cledit iconv
TRUE TRUE TRUE TRUE FALSE TRUE
NLS profmem cairo ICU long.double libcurl
TRUE TRUE TRUE TRUE TRUE TRUE