解决“多字节字符串有错”导致中文书籍（Html）上传book.org失败

residual-sun · 2023年4月12日

问题描述

我用李东风老师制作的中文图书模板写了一本简单的中文书，直接点击Rstudio右上角的publish按钮，想以html的形式上传到自己的book.org，但是遇到如下问题。

运行结果

问题1：

根据报错我自己判断好像是因为缺少textshaping包，导致最后说“多字节字符串有错”。但是已经下载到了library文件夹，同时找不到fribidi包。为简洁说明，我直接贴出error message和warning message。

[Connect] 2023/04/12 02:45:54.492774266 [1] "Command failed (1)\n\nFailed to run system command:\n\n\t'/opt/R/3.6.2/lib/R/bin/R' --vanilla CMD INSTALL --preclean '/opt/rstudio-connect/mnt/tmp/RtmpA2twbs/packrat-install-5a5774df2baf/textshaping' --library='/opt/rstudio-connect/mnt/app/packrat/lib/x86_64-pc-linux-gnu/3.6.2' --install-tests --no-docs --no-multiarch --no-demo \n\nThe command failed with output:\n* installing source package ‘textshaping’ ...\n** package ‘textshaping’ successfully unpacked and MD5 sums checked\n** using staged installation\nPackage fribidi was not found in the pkg-config search path.\nPerhaps you should add the directory containing fribidi.pc'\nto the PKG_CONFIG_PATH environment variable\nNo package 'fribidi' found\nUsing PKG_CFLAGS=\nUsing PKG_LIBS=-lfreetype -lharfbuzz -lfribidi -lpng\n--------------------------- [ANTICONF] --------------------------------\nConfiguration failed to find the harfbuzz freetype2 fribidi library. Try installing:\n * deb: libharfbuzz-dev libfribidi-de [Connect] v (Debian, Ubuntu, etc)\n * rpm: harfbuzz-devel fribidi-devel (Fedora, EPEL)\n * csw: libharfbuzz_dev libfribidi_dev (Solaris)\n * brew: harfbuzz fribidi (OSX)\nIf harfbuzz freetype2 fribidi is already installed, check that 'pkg-config' is in your\nPATH and PKG_CONFIG_PATH contains a harfbuzz freetype2 fribidi.pc file. If pkg-config\nis unavailable you can set INCLUDE_DIR and LIB_DIR manually via:\nR CMD INSTALL --configure-vars='INCLUDE_DIR=... LIB_DIR=...'\n-------------------------- [ERROR MESSAGE] ---------------------------\n<stdin>:1:10: fatal error: hb-ft.h: No such file or directory\ncompilation terminated.\n--------------------------------------------------------------------\nERROR: configuration failed for package ‘textshaping’\n* removing ‘/opt/rstudio-connect/mnt/app/packrat/lib/x86_64-pc-linux-gnu/3.6.2/textshaping’" [Connect] 2023/04/12 02:45:54.494743145 Error: Command failed (1) [Connect] 2023/04/12 02:45:54.494752457 [Connect] 2023/04/12 02:45:54.494783089 Failed to run system command: [Connect] 2023/04/12 02:45:54.494784293 [Connect] 2023/04/12 02:45:54.494804077 '/opt/R/3.6.2/lib/R/bin/R' --vanilla CMD INSTALL --preclean '/opt/rstudio-connect/mnt/tmp/RtmpA2twbs/packrat-install-5a5774df2baf/textshaping' --library='/opt/rstudio-connect/mnt/app/packrat/lib/x86_64-pc-linux-gnu/3.6.2' --install-tests --no-docs --no-multiarch --no-demo [Connect] 2023/04/12 02:45:54.494805312 [Connect] 2023/04/12 02:45:54.494818812 The command failed with output: [Connect] 2023/04/12 02:45:54.494819766 * installing *source* package ‘textshaping’ ... [Connect] 2023/04/12 02:45:54.494827266 ** package ‘textshaping’ successfully unpacked and MD5 sums checked [Connect] 2023/04/12 02:45:54.494828394 ** using staged installation [Connect] 2023/04/12 02:45:54.494835655 Package fribidi was not found in the pkg-config search path. [Connect] 2023/04/12 02:45:54.494836974 Perhaps you should add the directory containingfribidi.pc'
[Connect] 2023/04/12 02:45:54.494843995 to the PKG_CONFIG_PATH environment variable
[Connect] 2023/04/12 02:45:54.494845139 No package 'fribidi' found
[Connect] 2023/04/12 02:45:54.494852606 Using PKG_CFLAGS=
[Connect] 2023/04/12 02:45:54.494853486 Using PKG_LIBS=-lfreetype -lharfbuzz -lfribidi -lpng
[Connect] 2023/04/12 02:45:54.494860396 --------------------------- [ANTICONF] --------------------------------
[Connect] 2023/04/12 02:45:54.494861120 Configuration failed to find the harfbuzz freetype2 fribidi library. Try installing:
[Connect] 2023/04/12 02:45:54.494868246 * deb: libharfbuzz-dev libfribidi-dev (Debian, Ubuntu, etc)
[Connect] 2023/04/12 02:45:54.494868927 * rpm: harfbuzz-devel fribidi-devel (Fedora, EPEL)
[Connect] 2023/04/12 02:45:54.494875945 * csw: libharfbuzz_dev libfribidi_dev (Solaris)
[Connect] 2023/04/12 02:45:54.494876582 * brew: harfbuzz fribidi (OSX)
[Connect] 2023/04/12 02:45:54.494883071 If harfbuzz freetype2 fribidi is already installed, check that 'pkg-config' is in your
[Connect] 2023/04/12 02:45:54.494883704 PATH and PKG_CONFIG_PATH contains a harfbuzz freetype2 fribidi.pc file. If pkg-config
[Connect] 2023/04/12 02:45:54.494890275 is unavailable you can set INCLUDE_DIR and LIB_DIR manually via:
[Connect] 2023/04/12 02:45:54.494891249 R CMD INSTALL --configure-vars='INCLUDE_DIR=... LIB_DIR=...'
[Connect] 2023/04/12 02:45:54.494897935 -------------------------- [ERROR MESSAGE] ---------------------------
[Connect] 2023/04/12 02:45:54.494898551 <stdin>:1:10: fatal error: hb-ft.h: No such file or directory
[Connect] 2023/04/12 02:45:54.494905176 compilation terminated.
[Connect] 2023/04/12 02:45:54.494905826 --------------------------------------------------------------------
[Connect] 2023/04/12 02:45:54.494912210 ERROR: configuration failed for package ‘textshaping’
[Connect] 2023/04/12 02:45:54.494912920 * removing ‘/opt/rstudio-connect/mnt/app/packrat/lib/x86_64-pc-linux-gnu/3.6.2/textshaping’
[Connect] 2023/04/12 02:45:54.494919516
[Connect] 2023/04/12 02:45:54.494920110 Unable to fully restore the R packages associated with this deployment.
[Connect] 2023/04/12 02:45:54.494926346 Please review the preceding messages to determine which package
[Connect] 2023/04/12 02:45:54.494927000 encountered installation difficulty and the cause of the failure.
[Connect] 2023/04/12 02:45:54.504290549 Warning message:
[Connect] 2023/04/12 02:45:54.504500788 In packrat::restore(overwrite.dirty = TRUE, prompt = FALSE, restart = FALSE) :
[Connect] 2023/04/12 02:45:54.504505763 The most recent snapshot was generated using R version 4.2.3
[Connect] An error occurred while building your content.
[Connect] This link offers advice for this kind of error:
[Connect] https://docs.posit.co/connect/user/troubleshooting/#r-missing-system-library
[Connect] Build error: An error occurred while building your content. (Error code: r-missing-system-library)
Site deployment failed with error: An error occurred while building your content. (Error code: r-missing-system-library)
Warning message:
Error detecting locale: Error in make.names(col.names, unique = TRUE): '<d6><f7><bb><fa>'多字节字符串有错
(Using default: en_US)

我想过可能是输入数据时导入格式不对，就将导入数据的格式改成如下，在原来的基础上添加encoding = "UTF-8"：

library(haven)
netizen <- read_stata("eman.dta", encoding = "UTF-8")

但上传的时候还是显示一样的报错信息。

问题2：

在Markers界面，显示如下信息。

0101-usage.Rmd
Line 48 Paths should be to files within the project directory

我回到Rmd文件“0101-usage.Rmd”的第48行，是数据导入部分，如下所示。

library(haven)
netizen <- read_stata("eman.dta")
dput("netizen")

我的数据文件eman.dta是放在和“CBook.Rproj”同一个文件夹中的，不清楚错误在哪。

我的系统环境

sessionInfo()
R version 4.2.3 (2023-03-15 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 22621)

Matrix products: default

locale:
[1] LC_COLLATE=Chinese (Simplified)China.utf8 LC_CTYPE=Chinese (Simplified)China.utf8
[3] LC_MONETARY=Chinese (Simplified)China.utf8 LC_NUMERIC=C
[5] LC_TIME=Chinese (Simplified)China.utf8

attached base packages:
[1] stats graphics grDevices utils datasets methods base

loaded via a namespace (and not attached):
[1] rstudioapi_0.14 knitr_1.42 magrittr_2.0.3 tidyselect_1.2.0 R6_2.5.1
[6] rlang_1.1.0 fastmap_1.1.1 fansi_1.0.4 skimr_2.1.5 dplyr_1.1.1
[11] tools_4.2.3 xfun_0.38 utf8_1.2.3 cli_3.6.1 jquerylib_0.1.4
[16] htmltools_0.5.5 askpass_1.1 openssl_2.0.6 yaml_2.3.7 digest_0.6.31
[21] tibble_3.2.1 lifecycle_1.0.3 bookdown_0.33 repr_1.1.6 base64enc_0.1-3
[26] vctrs_0.6.1 rsconnect_0.8.29 curl_5.0.0 glue_1.6.2 evaluate_0.20
[31] rmarkdown_2.21 compiler_4.2.3 pillar_1.9.0 generics_0.1.3 jsonlite_1.8.4
[36] pkgconfig_2.0.3

Cloud2016 · 2023年4月13日

residual-sun 我没试过将书籍源码交给 RStudio Connect 去编译的情况，因为这需要清楚了解 RStudio Connect 系统上的 R 包和软件依赖。你可以本地编译好，然后发布到上面去，帮助文档在这。

residual-sun · 2023年4月14日

Cloud2016 感谢帮助！我按照帮助文档中的如下代码进行运行
publish_book(render = "local", account = "residualsun1")
虽然控制台仍然显示“多字节字符串有错”，但编译的图书内容已成功发布到bookdown.org的content上！
只是不理解命令中sever参数应该怎么设置，这是用来设置自己的URL地址吗？我想设置一个私人的URL存储自己的图书内容，尝试设置为如下
publish_book(render = "local", account = "residualsun1", server = "https://bookdown.org/residualsun1/Amospractice")
运行之后显示如下结果：

Error: You must register an account using setAccountInfo prior to proceeding.

报错说我需要有一个账户，但我已经有一个residualsun1的账号，前面上传成功的内容就在https://bookdown.org/content/98abdc9d-3a06-44aa-829f-12840a32dfbd/。我注意到这里上传的是在content（应该是公用的），如果要设置一个个人的地址，好像和posit的API相关，但没在益辉大哥写的文档中找到具体的说明。

Cloud2016 · 2023年4月14日

residual-sun

下面是我的账户设置，你可以照着替换一下

rsconnect::addConnectServer("https://bookdown.org", "bookdown.org")
rsconnect::connectApiUser(
  account = "xiangyun", server = "bookdown.org",
  apiKey = Sys.getenv("CONNECT_API_KEY")
)

account 和 apiKey 换成你的，server 就是 bookdown.org

residual-sun · 2023年4月15日

Cloud2016 您好！我按照您的代码替换了一下，如下：

rsconnect::addConnectServer("https://bookdown.org", "bookdown.org")
rsconnect::connectApiUser(
     account = "residualsun1", server = "bookdown.org",
     apiKey = Sys.getenv("fFkbuRH3j2eQ9bxBssKhgLHXaSrEY6XK")
 )

运行之后出现以下信息。

Server 'bookdown.org' added successfully: https://bookdown.org/__api__
The account 'residualsun1' is already registered; attempting to reconnect it.
Error: HTTP 401
GET https://bookdown.org/__api__/users/current
We couldn't log you in with the provided credentials. Please ask your administrator for assistance.

我想account应该是用在posit connect上用邮箱创的账号，只有一个。然后报错说无法根据我提供的凭证登录，不知道是不是没有找到我设置的API（我只设置了一个API）。

Cloud2016 · 2023年4月15日

residual-sun
你这里只需

apiKey = "fFkbuRH3j2eQ9bxBssKhgLHXaSrEY6XK"

我上面是设置了一个环境变量 CONNECT_API_KEY 指向密钥。

residual-sun · 2023年4月15日

Cloud2016 您好！根据您的建议，我将代码修改如下：

rsconnect::addConnectServer("https://bookdown.org", "bookdown.org")
rsconnect::connectApiUser(
     account = "residualsun1", server = "bookdown.org",
     apiKey = "fFkbuRH3j2eQ9bxBssKhgLHXaSrEY6XK"
 )

两行代码都运行成功，反馈信息如下：

Server 'bookdown.org' added successfully: https://bookdown.org/__api__
The account 'residualsun1' is already registered; attempting to reconnect it.
Account registered successfully: residualsun1

不过发布书籍的时候，我应该还是在sever的设置上没能理解，出错了，代码如下：
publish_book(render = "local", account = "residualsun1", server = "https://bookdown.org/residualsun1/Amospractice")

运行结果如下：

Output created: docs/index.html
Error: You must register an account using setAccountInfo prior to proceeding.

我的目的是发布到一个属于自己的URL，例如这次期望形成的URL是“https://bookdown.org/residualsun1/knowledge/Amospractice”。
其中，residualsun1是我的账户名，knowledge是账户的下一级，Amospractice是书籍的名字，这样我以后发布其他梳理知识的书籍也可以放到knowledge的下一级，便于管理。比如我这次想上传的是Amos软件的练习笔记，我命名为Amospractice，下一次我想上传Stata软件的练习笔记，就会命名为Statapractice，期望创建的URL则为“https://bookdown.org/residualsun1/knowledge/Statapractice”。
请问这是在server的具体参数设置中实现吗？

Cloud2016 · 2023年4月15日

residual-sun
publish_book 函数设置如下

publish_book(
  name = "书名",
  account ="residualsun1",
  server = "bookdown.org",
  render = "none"
)

推荐看一下该函数的帮助文档。

Cloud2016 · 2023年4月15日

residual-sun 其中，residualsun1是我的账户名，knowledge是账户的下一级，Amospractice是书籍的名字，这样我以后发布其他梳理知识的书籍也可以放到knowledge的下一级，便于管理。

不可以。除非你自己搭建服务器。

residual-sun · 2023年4月15日

Cloud2016 按照您提供的参考代码，我已成功设置自己期望的URL地址（这个问题困扰了我差不多一个星期），十分感谢您的耐心解答！（我会去补一补publish_book的函数帮助文档内容的！）

residual-sun · 2023年4月15日

Cloud2016 好的！这个我会自行去网络查找相关的内容，真的很感谢您的慷慨解答！（哈哈，有点柳暗花明又一村的感觉）